| APOEL FC (Cyp) | Trabzonspor (Tur) | 1-1 |
| Hapoel Tel-Aviv FC (Isr) | NK Dom¸ale (Slo) | 1-2 |
| PFC CSKA Sofia (Bul) | FK Hajduk Kula (Kro) | 0-0 |
| KSV Roeselare (Bel) | Ethnikos Achnas FC (Cyp) | 2-1 |
| OFK Beograd (Ser) | AJ Auxerre (Fra) | 1-0 (Di) |
| FC Dinamo Boekarest (Roe) | Beitar Jeruzalem FC (Isr) | 1-0 |
| FK Partizan (Ser) | NK Maribor (Slo) | 2-1 |
| FK Sarajevo (Bos) | AFC Rapid Boekarest (Roe) | 1-0 |
| Bnei Yehuda Tel-Aviv FC (Isr) | PFC Lokomotiv Sofia (Bul) | 0-2 |
| AC Omonia (Cyp) | PFC Litex Lovech (Bul) | 0-0 (Di) |
| KF Tirana (Alb) | Kayserispor (Tur) | 0-2 |
| FC Artmedia (Slw) | FC Dinamo Minsk (WRu) | 2-1 |
| SV Ried (Oos) | FC Sion (Zwi) | 0-0 |
| FC Fehérvár (Hon) | Grasshopper-Club (Zwi) | 1-1 |
| FK Karvan Evlakh (Aze) | SK Slavia Praag (Tsj) | 0-2 |
| FC Chornomorets Odessa (Oek) | Wisła Płock (Pol) | 0-0 |
| FC Basel 1893 (Zwi) | FC Vaduz (Lie) | 1-0 |
| CSF Zimbru Chisinau (Mol) | FC Metalurh Zaporizhya (Oek) | 0-0 |
| SV Mattersburg (Oos) | Wisła Kraków (Pol) | 1-1 |
| Hertha BSC Berlin (Dui) | FC Ameri Tbilisi (Geo) | 1-0 |
| FC Rubin Kazan (Rus) | FC BATE Borisov (WRu) | 3-0 |
| BSC Young Boys (Zwi) | Olympique de Marseille (Fra) | 3-3 |
| IK Start (Noo) | Drogheda United FC (Ier) | 1-0 |
| Odense BK (Den) | Llanelli AFC (Wal) | 1-0 |
| Randers FC (Den) | FBK Kaunas (Lit) | 3-1 |
| FC Twente | FC Levadia Tallinn (Est) | 1-1 |
| FK Ventspils (Let) | Newcastle United FC (Eng) | 0-1 |
| SK Brann (Noo) | Ċtvidabergs FF (Zwe) | 3-3 |
| Molde FK (Noo) | Skonto FC (Let) | 0-0 |
| FC Flora (Est) | Brĝndby IF (Den) | 0-0 |
| FK Sūduva (Lit) | Club Brugge KV (Bel) | 0-2 |
| Gretna FC (Sch) | Derry City FC (Ier) | 1-5 |
